gt_gating.Rd
It loads the gating methods by topological order and applies them to GatingSet
.
gt_gating(x, y, ...)
x | a |
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y | a |
... |
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Nothing. As the side effect, gates generated by gating methods are saved in GatingSet
.
if (FALSE) { gt <- gatingTemplate(file.path(path, "data/ICStemplate.csv"), "ICS") gs <- GatingSet(fs) #fs is a flowSet/ncdfFlowSet gt_gating(gt, gs) gt_gating(gt, gs, stop.at = "v") #proceed the gating until population 'v' gt_gating(gt, gs, start = "v") # start from 'v' gt_gating(gt, gs, parallel_type = "multicore", mc.cores = 8) #parallel gating using multicore #parallel gating by using cluster cl1 <- makeCluster (8, type = "MPI") gt_gating(gt, gs, parallel_type = "cluster", cl = cl1) stopCluster ( cl1 ) }